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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs1652354 chr18:21167333 A/C 1.54E-6 488 15.67 16.83 14.3 KM Plot
THCA rs1652355 chr18:21169035 G/A 1.59E-6 484 15.63 16.92 14.3 KM Plot
THCA rs1652356 chr18:21169386 C/T 1.08E-6 475 15.63 16.8 14.3 KM Plot
THCA rs1659228 chr15:41471978 A/G 0.000287 490 15.23 15.9 17.6 KM Plot
THCA rs1662897 chr18:47726297 A/C 1.11E-16 473 5.8 15.23 16.37 KM Plot
THCA rs16822379 chr1:184027676 T/C 1.0E-5 488 15 17.13 21.65 KM Plot
THCA rs16824128 chr1:37890951 A/G 2.15E-5 490 8.2 14.87 16.23 KM Plot
THCA rs16826278 chr1:22386722 T/A 1.47E-7 484 15.25 17.93 6.57 KM Plot
THCA rs16826279 chr1:22386859 A/G 4.14E-8 489 15.3 17.68 9.47 KM Plot
THCA rs16826309 chr1:22389388 A/G 4.14E-8 489 15.3 17.68 9.47 KM Plot
THCA rs16826425 chr1:22401024 G/A 5.87E-8 487 15.17 17.68 9.47 KM Plot
THCA rs16836160 chr2:201813830 G/A 0.000101 489 16.07 16.33 4.72 KM Plot
THCA rs16837805 chr1:156913449 C/T 1.23E-6 486 16.57 15.68 11.3 KM Plot
THCA rs16837807 chr1:156914070 C/A 1.51E-7 487 16.92 14.93 11.48 KM Plot
THCA rs16838366 chr3:96810862 C/G 2.34E-10 489 15.93 15.17 24.65 KM Plot